| distance | reference number | name | latitude | longitude |
| 2.6 | 2888 | Southwest Fork (spillway), Loxahatchee River, Flori | 26.935 | -80.1433 |
| 3.0 | 2889 | Southwest Fork, 0.5 mile above entrance, Loxahatche | 26.9433 | -80.12 |
| 3.3 | 1582 | Lake Worth Creek, Day Beacon 19, ICWW, Loxahatchee | 26.9117 | -80.08 |
| 3.7 | 1450 | Jupiter, Lake Worth Creek, ICWW, Loxahatchee River, | 26.935 | -80.085 |
| 3.8 | 799 | Donald Ross Bridge, ICWW, Loxahatchee River, Florid | 26.8817 | -80.07 |
| 3.8 | 3053 | Tequesta, Loxahatchee River, Florida | 26.95 | -80.1017 |
| 3.9 | 3054 | Tequesta, North Fork entrance, Loxahatchee River, F | 26.9517 | -80.1017 |
| 4.0 | 2 | A1A highway bridge, Loxahatchee River, Florida | 26.9467 | -80.09 |
| 4.3 | 3055 | Tequesta, North Fork, Loxahatchee River, Florida | 26.96 | -80.105 |
| 4.3 | 1448 | Jupiter Inlet, U.S. Highway 1 Bridge, Florida | 26.9483 | -80.085 |
| 4.6 | 1712 | Loxahatchee River, 3 miles above A1A highway bridge | 26.97 | -80.125 |
| 4.6 | 1447 | Jupiter Inlet, south jetty, Florida | 26.9433 | -80.0733 |
| 4.7 | 1449 | Jupiter Sound, south end, Florida | 26.9517 | -80.0783 |
| 4.9 | 2238 | PGA Boulevard Bridge, ICWW, Loxahatchee River, Flor | 26.8433 | -80.0667 |
| 5.0 | 2031 | North Fork, 2 miles above entrance, Loxahatchee Riv | 26.9767 | -80.115 |
| 5.6 | 320 | Boy Scout Dock, Loxahatchee River, Florida | 26.9867 | -80.1417 |
| 6.1 | 621 | Conch Bar, Jupiter Sound, Florida | 26.9883 | -80.0933 |
| 6.1 | 1586 | Lake Worth, North Palm Beach, Florida | 26.8267 | -80.055 |
| 8.7 | 1286 | Hobe Sound, Jupiter Island, Florida | 27.0367 | -80.1067 |
| 8.9 | 2406 | Port of Palm Beach, Florida | 26.77 | -80.0517 |
| 10.2 | 1285 | Hobe Sound bridge, Florida | 27.0633 | -80.1233 |
| 11.1 | 2173 | Palm Beach, Florida | 26.7333 | -80.0417 |
| 12.1 | 1119 | Gomez, South Jupiter Narrows, Florida | 27.095 | -80.1367 |
| 12.5 | 2174 | Palm Beach, Highway 704 bridge, Lake Worth, Florida | 26.705 | -80.045 |
| 13.2 | 2211 | Peck Lake, ICWW, Florida | 27.1133 | -80.145 |